sklearn cross_val_score交叉验证 使用sklearn的cross_val_score进行交叉验证实例

from sklearn import datasets #自带数据集
from sklearn.model_selection import train_test_split,cross_val_score #划分数据 交叉验证
from sklearn.neighbors import KNeighborsClassifier #一个简单的模型，只有K一个参数，类似K-means
import matplotlib.pyplot as plt
iris = datasets.load_iris() #加载sklearn自带的数据集
X = iris.data #这是数据
y = iris.target #这是每个数据所对应的标签
train_X,test_X,train_y,test_y = train_test_split(X,y,test_size=1/3,random_state=3) #这里划分数据以1/3的来划分 训练集训练结果 测试集测试结果
k_range = range(1,31)
cv_scores = [] #用来放每个模型的结果值
for n in k_range:
 knn = KNeighborsClassifier(n) #knn模型，这里一个超参数可以做预测，当多个超参数时需要使用另一种方法GridSearchCV
 scores = cross_val_score(knn,train_X,train_y,cv=10,scoring='accuracy') #cv：选择每次测试折数 accuracy：评价指标是准确度,可以省略使用默认值，具体使用参考下面。
 cv_scores.append(scores.mean())
plt.plot(k_range,cv_scores)
plt.xlabel('K')
plt.ylabel('Accuracy') #通过图像选择最好的参数
plt.show()
best_knn = KNeighborsClassifier(n_neighbors=3) # 选择最优的K=3传入模型
best_knn.fit(train_X,train_y) #训练模型
print(best_knn.score(test_X,test_y)) #看看评分

import os
import numpy as np
import pandas as pd
from sklearn import datasets
from sklearn import preprocessing
from sklearn import neighbors
from sklearn.discriminant_analysis import LinearDiscriminantAnalysis
from sklearn import svm
from sklearn.ensemble import RandomForestClassifier
from sklearn.model_selection import train_test_split
from sklearn.model_selection import StratifiedKFold
from sklearn.linear_model import LogisticRegression
from sklearn.model_selection import GridSearchCV
from time import time
from sklearn.naive_bayes import MultinomialNB
from sklearn import tree
from sklearn.ensemble import GradientBoostingClassifier

#读取sklearn自带的数据集（鸢尾花）
def getData_1():
 iris = datasets.load_iris()
 X = iris.data #样本特征矩阵，150*4矩阵，每行一个样本，每个样本维度是4
 y = iris.target #样本类别矩阵，150维行向量，每个元素代表一个样本的类别
#读取本地excel表格内的数据集（抽取每类60%样本组成训练集，剩余样本组成测试集）
#返回一个元祖，其内有4个元素（类型均为numpy.ndarray）：
#（1）归一化后的训练集矩阵，每行为一个训练样本，矩阵行数=训练样本总数，矩阵列数=每个训练样本的特征数
#（2）每个训练样本的类标
#（3）归一化后的测试集矩阵，每行为一个测试样本，矩阵行数=测试样本总数，矩阵列数=每个测试样本的特征数
#（4）每个测试样本的类标
#【注】归一化采用“最大最小值”方法。
def getData_2():
 fPath = 'D:\分类算法\binary_classify_data.txt'
 if os.path.exists(fPath):
  data = pd.read_csv(fPath,header=None,skiprows=1,names=['class0','pixel0','pixel1','pixel2','pixel3'])
  X_train1, X_test1, y_train1, y_test1 = train_test_split(data, data['class0'], test_size = 0.4, random_state = 0)
  min_max_scaler = preprocessing.MinMaxScaler() #归一化
  X_train_minmax = min_max_scaler.fit_transform(np.array(X_train1))
  X_test_minmax = min_max_scaler.fit_transform(np.array(X_test1))
  return (X_train_minmax, np.array(y_train1), X_test_minmax, np.array(y_test1))
 else:
  print ('No such file or directory!')

#读取本地excel表格内的数据集（每类随机生成K个训练集和测试集的组合）
#【K的含义】假设一共有1000个样本，K取10，那么就将这1000个样本切分10份（一份100个），那么就产生了10个测试集
#对于每一份的测试集，剩余900个样本即作为训练集
#结果返回一个字典：键为集合编号（1train, 1trainclass, 1test, 1testclass, 2train, 2trainclass, 2test, 2testclass...），值为数据
#其中1train和1test为随机生成的第一组训练集和测试集（1trainclass和1testclass为训练样本类别和测试样本类别），其他以此类推
def getData_3():
 fPath = 'D:\\分类算法\\binary_classify_data.txt'
 if os.path.exists(fPath):
  #读取csv文件内的数据，
  dataMatrix = np.array(pd.read_csv(fPath,header=None,skiprows=1,names=['class0','pixel0','pixel1','pixel2','pixel3']))
  #获取每个样本的特征以及类标
  rowNum, colNum = dataMatrix.shape[0], dataMatrix.shape[1]
  sampleData = []
  sampleClass = []
  for i in range(0, rowNum):
   tempList = list(dataMatrix[i,:])
   sampleClass.append(tempList[0])
   sampleData.append(tempList[1:])
  sampleM = np.array(sampleData) #二维矩阵，一行是一个样本，行数=样本总数，列数=样本特征数
  classM = np.array(sampleClass) #一维列向量，每个元素对应每个样本所属类别
  #调用StratifiedKFold方法生成训练集和测试集
  skf = StratifiedKFold(n_splits = 10)
  setDict = {} #创建字典，用于存储生成的训练集和测试集
  count = 1
  for trainI, testI in skf.split(sampleM, classM):
   trainSTemp = [] #用于存储当前循环抽取出的训练样本数据
   trainCTemp = [] #用于存储当前循环抽取出的训练样本类标
   testSTemp = [] #用于存储当前循环抽取出的测试样本数据
   testCTemp = [] #用于存储当前循环抽取出的测试样本类标
   #生成训练集
   trainIndex = list(trainI)
   for t1 in range(0, len(trainIndex)):
    trainNum = trainIndex[t1]
    trainSTemp.append(list(sampleM[trainNum, :]))
    trainCTemp.append(list(classM)[trainNum])
   setDict[str(count) + 'train'] = np.array(trainSTemp)
   setDict[str(count) + 'trainclass'] = np.array(trainCTemp)
   #生成测试集
   testIndex = list(testI)
   for t2 in range(0, len(testIndex)):
    testNum = testIndex[t2]
    testSTemp.append(list(sampleM[testNum, :]))
    testCTemp.append(list(classM)[testNum])
   setDict[str(count) + 'test'] = np.array(testSTemp)
   setDict[str(count) + 'testclass'] = np.array(testCTemp)
   count += 1
  return setDict
 else:
  print ('No such file or directory!')
#K近邻（K Nearest Neighbor）
def KNN():
 clf = neighbors.KNeighborsClassifier()
 return clf

#线性鉴别分析（Linear Discriminant Analysis）
def LDA():
 clf = LinearDiscriminantAnalysis()
 return clf

#支持向量机（Support Vector Machine）
def SVM():
 clf = svm.SVC()
 return clf

#逻辑回归（Logistic Regression）
def LR():
 clf = LogisticRegression()
 return clf

#随机森林决策树（Random Forest）
def RF():
 clf = RandomForestClassifier()
 return clf

#多项式朴素贝叶斯分类器
def native_bayes_classifier():
 clf = MultinomialNB(alpha = 0.01)
 return clf

#决策树
def decision_tree_classifier():
 clf = tree.DecisionTreeClassifier()
 return clf

#GBDT
def gradient_boosting_classifier():
 clf = GradientBoostingClassifier(n_estimators = 200)
 return clf

#计算识别率
def getRecognitionRate(testPre, testClass):
 testNum = len(testPre)
 rightNum = 0
 for i in range(0, testNum):
  if testClass[i] == testPre[i]:
   rightNum += 1
 return float(rightNum) / float(testNum)

#report函数，将调参的详细结果存储到本地F盘（路径可自行修改，其中n_top是指定输出前多少个最优参数组合以及该组合的模型得分）
def report(results, n_top=5488):
 f = open('F:/grid_search_rf.txt', 'w')
 for i in range(1, n_top + 1):
  candidates = np.flatnonzero(results['rank_test_score'] == i)
  for candidate in candidates:
   f.write("Model with rank: {0}".format(i) + '\n')
   f.write("Mean validation score: {0:.3f} (std: {1:.3f})".format(
     results['mean_test_score'][candidate],
     results['std_test_score'][candidate]) + '\n')
   f.write("Parameters: {0}".format(results['params'][candidate]) + '\n')
   f.write("\n")
 f.close()

#自动调参（以随机森林为例）
def selectRFParam():
 clf_RF = RF()
 param_grid = {"max_depth": [3,15],
     "min_samples_split": [3, 5, 10],
     "min_samples_leaf": [3, 5, 10],
     "bootstrap": [True, False],
     "criterion": ["gini", "entropy"],
     "n_estimators": range(10,50,10)}
     # "class_weight": [{0:1,1:13.24503311,2:1.315789474,3:12.42236025,4:8.163265306,5:31.25,6:4.77326969,7:19.41747573}],
     # "max_features": range(3,10),
     # "warm_start": [True, False],
     # "oob_score": [True, False],
     # "verbose": [True, False]}
 grid_search = GridSearchCV(clf_RF, param_grid=param_grid, n_jobs=4)
 start = time()
 T = getData_2() #获取数据集
 grid_search.fit(T[0], T[1]) #传入训练集矩阵和训练样本类标
 print("GridSearchCV took %.2f seconds for %d candidate parameter settings."
   % (time() - start, len(grid_search.cv_results_['params'])))
 report(grid_search.cv_results_)

#“主”函数1（KFold方法生成K个训练集和测试集，即数据集采用getData_3()函数获取，计算这K个组合的平均识别率）
def totalAlgorithm_1():
 #获取各个分类器
 clf_KNN = KNN()
 clf_LDA = LDA()
 clf_SVM = SVM()
 clf_LR = LR()
 clf_RF = RF()
 clf_NBC = native_bayes_classifier()
 clf_DTC = decision_tree_classifier()
 clf_GBDT = gradient_boosting_classifier()
 #获取训练集和测试集
 setDict = getData_3()
 setNums = len(setDict.keys()) / 4 #一共生成了setNums个训练集和setNums个测试集，它们之间是一一对应关系
 #定义变量，用于将每个分类器的所有识别率累加
 KNN_rate = 0.0
 LDA_rate = 0.0
 SVM_rate = 0.0
 LR_rate = 0.0
 RF_rate = 0.0
 NBC_rate = 0.0
 DTC_rate = 0.0
 GBDT_rate = 0.0
 for i in range(1, int(setNums + 1)):
  trainMatrix = setDict[str(i) + 'train']
  trainClass = setDict[str(i) + 'trainclass']
  testMatrix = setDict[str(i) + 'test']
  testClass = setDict[str(i) + 'testclass']
  #输入训练样本
  clf_KNN.fit(trainMatrix, trainClass)
  clf_LDA.fit(trainMatrix, trainClass)
  clf_SVM.fit(trainMatrix, trainClass)
  clf_LR.fit(trainMatrix, trainClass)
  clf_RF.fit(trainMatrix, trainClass)
  clf_NBC.fit(trainMatrix, trainClass)
  clf_DTC.fit(trainMatrix, trainClass)
  clf_GBDT.fit(trainMatrix, trainClass)
  #计算识别率
  KNN_rate += getRecognitionRate(clf_KNN.predict(testMatrix), testClass)
  LDA_rate += getRecognitionRate(clf_LDA.predict(testMatrix), testClass)
  SVM_rate += getRecognitionRate(clf_SVM.predict(testMatrix), testClass)
  LR_rate += getRecognitionRate(clf_LR.predict(testMatrix), testClass)
  RF_rate += getRecognitionRate(clf_RF.predict(testMatrix), testClass)
  NBC_rate += getRecognitionRate(clf_NBC.predict(testMatrix), testClass)
  DTC_rate += getRecognitionRate(clf_DTC.predict(testMatrix), testClass)
  GBDT_rate += getRecognitionRate(clf_GBDT.predict(testMatrix), testClass)
 #输出各个分类器的平均识别率（K个训练集测试集，计算平均）
 print
 print
 print
 print('K Nearest Neighbor mean recognition rate: ', KNN_rate / float(setNums))
 print('Linear Discriminant Analysis mean recognition rate: ', LDA_rate / float(setNums))
 print('Support Vector Machine mean recognition rate: ', SVM_rate / float(setNums))
 print('Logistic Regression mean recognition rate: ', LR_rate / float(setNums))
 print('Random Forest mean recognition rate: ', RF_rate / float(setNums))
 print('Native Bayes Classifier mean recognition rate: ', NBC_rate / float(setNums))
 print('Decision Tree Classifier mean recognition rate: ', DTC_rate / float(setNums))
 print('Gradient Boosting Decision Tree mean recognition rate: ', GBDT_rate / float(setNums))

#“主”函数2（每类前x%作为训练集，剩余作为测试集，即数据集用getData_2()方法获取，计算识别率）
def totalAlgorithm_2():
 #获取各个分类器
 clf_KNN = KNN()
 clf_LDA = LDA()
 clf_SVM = SVM()
 clf_LR = LR()
 clf_RF = RF()
 clf_NBC = native_bayes_classifier()
 clf_DTC = decision_tree_classifier()
 clf_GBDT = gradient_boosting_classifier()
 #获取训练集和测试集
 T = getData_2()
 trainMatrix, trainClass, testMatrix, testClass = T[0], T[1], T[2], T[3]
 #输入训练样本
 clf_KNN.fit(trainMatrix, trainClass)
 clf_LDA.fit(trainMatrix, trainClass)
 clf_SVM.fit(trainMatrix, trainClass)
 clf_LR.fit(trainMatrix, trainClass)
 clf_RF.fit(trainMatrix, trainClass)
 clf_NBC.fit(trainMatrix, trainClass)
 clf_DTC.fit(trainMatrix, trainClass)
 clf_GBDT.fit(trainMatrix, trainClass)
 #输出各个分类器的识别率
 print('K Nearest Neighbor recognition rate: ', getRecognitionRate(clf_KNN.predict(testMatrix), testClass))
 print('Linear Discriminant Analysis recognition rate: ', getRecognitionRate(clf_LDA.predict(testMatrix), testClass))
 print('Support Vector Machine recognition rate: ', getRecognitionRate(clf_SVM.predict(testMatrix), testClass))
 print('Logistic Regression recognition rate: ', getRecognitionRate(clf_LR.predict(testMatrix), testClass))
 print('Random Forest recognition rate: ', getRecognitionRate(clf_RF.predict(testMatrix), testClass))
 print('Native Bayes Classifier recognition rate: ', getRecognitionRate(clf_NBC.predict(testMatrix), testClass))
 print('Decision Tree Classifier recognition rate: ', getRecognitionRate(clf_DTC.predict(testMatrix), testClass))
 print('Gradient Boosting Decision Tree recognition rate: ', getRecognitionRate(clf_GBDT.predict(testMatrix), testClass))

if __name__ == '__main__':
 print('K个训练集和测试集的平均识别率')
 totalAlgorithm_1()
 print('每类前x%训练，剩余测试，各个模型的识别率')
 totalAlgorithm_2()
 selectRFParam()
 print('随机森林参数调优完成！')